Package: protViz
Type: Package
Title: Visualizing and Analyzing Mass Spectrometry Related Data in
        Proteomics
Version: 0.7.12
Authors@R: c(person("Christian", "Panse", email = "cp@fgcz.ethz.ch", role = c("aut", "cre"), 
        comment = c(ORCID = "0000-0003-1975-3064")),
	person("Jonas", "Grossmann", email = "jg@fgcz.ethz.ch", role = "aut",
	comment = c(ORCID = "0000-0002-6899-9020")),
	person("Simon", "Barkow-Oesterreicher", role = "ctb"))
Depends: R (>= 4.4), methods
Imports: Rcpp (>= 1.0)
LinkingTo: Rcpp (>= 1.0)
RcppModules: FastaMod
Suggests: lattice, testthat, xtable
Description: Helps with quality checks, visualizations and analysis of
        mass spectrometry data, coming from proteomics experiments. The
        package is developed, tested and used at the Functional
        Genomics Center Zurich <https://fgcz.ch>. We use this package
        mainly for prototyping, teaching, and having fun with
        proteomics data. But it can also be used to do data analysis
        for small scale data sets.
License: GPL-3
URL: https://github.com/cpanse/protViz/
BugReports: https://github.com/cpanse/protViz/issues
Collate: aa2mass.R centroid.R comet.R deisotoper.R de_novo.R findNN.R
        fragmentIon.R genMod.R iTRAQ2GroupAnalysis.R lcmsmap.R mascot.R
        mdp.R parentIonMass.R peakplot.R pepxml.R pgImporter.R pgLFQ.R
        pp.R psm.R queue.R PTM_MarkerFinder.R ssrc.R zzz.R
        RcppExports.R protViz-package.R
Encoding: UTF-8
LazyData: true
NeedsCompilation: yes
Repository: https://cpanse.r-universe.dev
Date/Publication: 2025-06-03 07:14:39 UTC
RemoteUrl: https://github.com/cpanse/protviz
RemoteRef: HEAD
RemoteSha: 5fd04bad2b069a8cb29fe49001d47eaf8c26b9e9
Packaged: 2026-07-04 16:02:37 UTC; root
Author: Christian Panse [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-1975-3064>),
  Jonas Grossmann [aut] (ORCID: <https://orcid.org/0000-0002-6899-9020>),
  Simon Barkow-Oesterreicher [ctb]
Maintainer: Christian Panse <cp@fgcz.ethz.ch>